STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DvMF_0880Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake. (226 aa)    
Predicted Functional Partners:
pstB
Phosphate ABC transporter, ATPase subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
  
 0.966
DvMF_2486
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lip:LI1030 phosphate ABC transporter, permease protein.
 
  
 0.930
DvMF_2485
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_0283 ABC transporter related; Belongs to the ABC transporter superfamily.
 
  
 0.921
DvMF_2488
TIGRFAM: phosphate binding protein; KEGG: lip:LI1028 phosphate-binding protein.
 
  
 0.895
DvMF_2567
TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csa:Csal_1478 phosphate transport system permease protein 2.
 
  
 0.889
DvMF_2487
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sfu:Sfum_0285 binding-protein-dependent transport systems inner membrane component.
 
  
 0.817
DvMF_2566
Phosphate ABC transporter, inner membrane subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
  
 0.733
DvMF_2565
KEGG: cch:Cag_0501 periplasmic phosphate binding protein.
 
  
 0.699
DvMF_1565
KEGG: dde:Dde_0512 hypothetical protein.
   
    0.614
DvMF_0878
PFAM: protein of unknown function UPF0052 and CofD; KEGG: sit:TM1040_2627 protein of unknown function UPF0052 and CofD.
       0.503
Your Current Organism:
Desulfovibrio vulgaris Miyazaki
NCBI taxonomy Id: 883
Other names: D. vulgaris str. 'Miyazaki F', Desulfovibrio vulgaris (strain Miyazaki), Desulfovibrio vulgaris str. 'Miyazaki F'
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