Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DvMF_0758 | DvMF_1065 | PFAM: SNARE associated Golgi protein; KEGG: dde:Dde_1595 hypothetical protein. | KEGG: dde:Dde_2545 hypothetical protein. | 0.581 |
DvMF_0758 | DvMF_1066 | PFAM: SNARE associated Golgi protein; KEGG: dde:Dde_1595 hypothetical protein. | KEGG: dde:Dde_2546 hypothetical protein. | 0.598 |
DvMF_0758 | DvMF_2347 | PFAM: SNARE associated Golgi protein; KEGG: dde:Dde_1595 hypothetical protein. | KEGG: dde:Dde_0307 hypothetical protein. | 0.536 |
DvMF_1062 | DvMF_1065 | PFAM: Tail Collar domain protein; KEGG: dde:Dde_1065 hypothetical protein. | KEGG: dde:Dde_2545 hypothetical protein. | 0.812 |
DvMF_1062 | DvMF_1066 | PFAM: Tail Collar domain protein; KEGG: dde:Dde_1065 hypothetical protein. | KEGG: dde:Dde_2546 hypothetical protein. | 0.789 |
DvMF_1062 | DvMF_1072 | PFAM: Tail Collar domain protein; KEGG: dde:Dde_1065 hypothetical protein. | KEGG: dde:Dde_2550 hypothetical protein. | 0.712 |
DvMF_1065 | DvMF_0758 | KEGG: dde:Dde_2545 hypothetical protein. | PFAM: SNARE associated Golgi protein; KEGG: dde:Dde_1595 hypothetical protein. | 0.581 |
DvMF_1065 | DvMF_1062 | KEGG: dde:Dde_2545 hypothetical protein. | PFAM: Tail Collar domain protein; KEGG: dde:Dde_1065 hypothetical protein. | 0.812 |
DvMF_1065 | DvMF_1066 | KEGG: dde:Dde_2545 hypothetical protein. | KEGG: dde:Dde_2546 hypothetical protein. | 0.955 |
DvMF_1065 | DvMF_1067 | KEGG: dde:Dde_2545 hypothetical protein. | Hypothetical protein; KEGG: fre:Franean1_1779 2-oxoglutarate dehydrogenase E2 component. | 0.773 |
DvMF_1065 | DvMF_1068 | KEGG: dde:Dde_2545 hypothetical protein. | Hypothetical protein. | 0.597 |
DvMF_1065 | DvMF_1072 | KEGG: dde:Dde_2545 hypothetical protein. | KEGG: dde:Dde_2550 hypothetical protein. | 0.866 |
DvMF_1065 | DvMF_1106 | KEGG: dde:Dde_2545 hypothetical protein. | KEGG: dde:Dde_2556 phage uncharacterized protein-like. | 0.425 |
DvMF_1065 | DvMF_1313 | KEGG: dde:Dde_2545 hypothetical protein. | KEGG: dde:Dde_3758 hypothetical protein. | 0.414 |
DvMF_1065 | DvMF_1664 | KEGG: dde:Dde_2545 hypothetical protein. | KEGG: mag:amb1193 hypothetical protein. | 0.601 |
DvMF_1065 | DvMF_2347 | KEGG: dde:Dde_2545 hypothetical protein. | KEGG: dde:Dde_0307 hypothetical protein. | 0.664 |
DvMF_1066 | DvMF_0758 | KEGG: dde:Dde_2546 hypothetical protein. | PFAM: SNARE associated Golgi protein; KEGG: dde:Dde_1595 hypothetical protein. | 0.598 |
DvMF_1066 | DvMF_1062 | KEGG: dde:Dde_2546 hypothetical protein. | PFAM: Tail Collar domain protein; KEGG: dde:Dde_1065 hypothetical protein. | 0.789 |
DvMF_1066 | DvMF_1065 | KEGG: dde:Dde_2546 hypothetical protein. | KEGG: dde:Dde_2545 hypothetical protein. | 0.955 |
DvMF_1066 | DvMF_1067 | KEGG: dde:Dde_2546 hypothetical protein. | Hypothetical protein; KEGG: fre:Franean1_1779 2-oxoglutarate dehydrogenase E2 component. | 0.773 |
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