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pyrB protein (Desulfovibrio vulgaris Miyazaki) - STRING interaction network
"pyrB" - KEGG: dde:Dde_2964 aspartate carbamoyltransferase catalytic subunit in Desulfovibrio vulgaris Miyazaki
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
pyrBKEGG- dde-Dde_2964 aspartate carbamoyltransferase catalytic subunit; TIGRFAM- aspartate carbamoyltransferase; PFAM- aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; Belongs to the ATCase/OTCase family (325 aa)    
Predicted Functional Partners:
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily (426 aa)
  0.999
carA
TIGRFAM- carbamoyl-phosphate synthase, small subunit; PFAM- glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; KEGG- dde-Dde_3646 carbamoyl phosphate synthase small subunit; Belongs to the CarA family (376 aa)
 
  0.999
carB
TIGRFAM- carbamoyl-phosphate synthase, large subunit; PFAM- ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG- dde-Dde_0333 carbamoyl-phosphate synthase large subunit; Belongs to the CarB family (1078 aa)
 
  0.999
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family (428 aa)
 
 
  0.961
pyrR
Bifunctional protein PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant (177 aa)
 
 
  0.957
pyrF
Orotidine 5’-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5’- monophosphate (OMP) to uridine 5’-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily (250 aa)
   
   
  0.939
argG
PFAM- argininosuccinate synthase; KEGG- dde-Dde_2531 argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily (401 aa)
   
 
  0.927
DvMF_0526
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate (530 aa)
       
  0.910
DvMF_2889
PFAM- aminotransferase class I and II; KEGG- dde-Dde_1103 aspartate aminotransferase (394 aa)
   
 
  0.903
DvMF_2204
Aminotransferase; PFAM- aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG- dde-Dde_3596 L-aspartate aminotransferase (390 aa)
   
 
  0.903
Your Current Organism:
Desulfovibrio vulgaris Miyazaki
NCBI taxonomy Id: 883
Other names: D. vulgaris str. 'Miyazaki F', Desulfovibrio vulgaris (strain Miyazaki), Desulfovibrio vulgaris Miyazaki, Desulfovibrio vulgaris str. 'Miyazaki F'
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