Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DvMF_1532 | DvMF_1533 | Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. | KEGG: rfr:Rfer_0025 hypothetical protein. | 0.545 |
DvMF_1532 | DvMF_1534 | Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. | KEGG: xac:XAC1166 hypothetical protein. | 0.545 |
DvMF_1533 | DvMF_1532 | KEGG: rfr:Rfer_0025 hypothetical protein. | Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. | 0.545 |
DvMF_1533 | DvMF_1534 | KEGG: rfr:Rfer_0025 hypothetical protein. | KEGG: xac:XAC1166 hypothetical protein. | 0.954 |
DvMF_1533 | DvMF_2568 | KEGG: rfr:Rfer_0025 hypothetical protein. | PFAM: filamentation induced by cAMP protein Fic; KEGG: dol:Dole_1842 filamentation induced by cAMP protein Fic. | 0.499 |
DvMF_1534 | DvMF_1532 | KEGG: xac:XAC1166 hypothetical protein. | Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. | 0.545 |
DvMF_1534 | DvMF_1533 | KEGG: xac:XAC1166 hypothetical protein. | KEGG: rfr:Rfer_0025 hypothetical protein. | 0.954 |
DvMF_1534 | DvMF_2568 | KEGG: xac:XAC1166 hypothetical protein. | PFAM: filamentation induced by cAMP protein Fic; KEGG: dol:Dole_1842 filamentation induced by cAMP protein Fic. | 0.542 |
DvMF_1534 | DvMF_3012 | KEGG: xac:XAC1166 hypothetical protein. | Hypothetical protein; KEGG: cth:Cthe_0239 cellulosome enzyme, dockerin type I. | 0.412 |
DvMF_2568 | DvMF_1533 | PFAM: filamentation induced by cAMP protein Fic; KEGG: dol:Dole_1842 filamentation induced by cAMP protein Fic. | KEGG: rfr:Rfer_0025 hypothetical protein. | 0.499 |
DvMF_2568 | DvMF_1534 | PFAM: filamentation induced by cAMP protein Fic; KEGG: dol:Dole_1842 filamentation induced by cAMP protein Fic. | KEGG: xac:XAC1166 hypothetical protein. | 0.542 |
DvMF_3012 | DvMF_1534 | Hypothetical protein; KEGG: cth:Cthe_0239 cellulosome enzyme, dockerin type I. | KEGG: xac:XAC1166 hypothetical protein. | 0.412 |