DvMF_1644 protein (Desulfovibrio vulgaris Miyazaki)

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DvMF_1644

KEGG: pfl:PFL_3748 hypothetical protein. (262 aa)

Predicted Functional Partners:

topA

0.990

DvMF_1758

0.986

polA

0.979

DvMF_3176

0.974

recD2

0.972

DvMF_0339

0.971

DvMF_0813

0.970

DvMF_1967

0.970

DvMF_2082

0.968

DvMF_1938

0.954

Your Current Organism:

Desulfovibrio vulgaris Miyazaki

NCBI taxonomy Id: 883
Other names: D. vulgaris str. 'Miyazaki F', Desulfovibrio vulgaris (strain Miyazaki), Desulfovibrio vulgaris str. 'Miyazaki F'

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DvMF_0339	DvMF_0813	DvMF_0339	DvMF_0813	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: dde:Dde_1998 recombination factor protein RarA.	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: dde:Dde_1545 single-strand binding protein.	0.679
DvMF_0339	DvMF_1644	DvMF_0339	DvMF_1644	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: dde:Dde_1998 recombination factor protein RarA.	KEGG: pfl:PFL_3748 hypothetical protein.	0.971
DvMF_0339	DvMF_1758	DvMF_0339	DvMF_1758	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: dde:Dde_1998 recombination factor protein RarA.	PFAM: UvrD/REP helicase; KEGG: dde:Dde_3499 ATP-dependent DNA helicase UvrD.	0.586
DvMF_0339	DvMF_1938	DvMF_0339	DvMF_1938	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: dde:Dde_1998 recombination factor protein RarA.	KEGG: dde:Dde_0177 DNA polymerase III, delta prime subunit, putative.	0.734
DvMF_0339	DvMF_1967	DvMF_0339	DvMF_1967	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: dde:Dde_1998 recombination factor protein RarA.	PFAM: UvrD/REP helicase; KEGG: dde:Dde_3571 ATP-dependent DNA helicase UvrD.	0.704
DvMF_0339	DvMF_2082	DvMF_0339	DvMF_2082	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: dde:Dde_1998 recombination factor protein RarA.	KEGG: dde:Dde_0002 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain.	0.939
DvMF_0339	polA	DvMF_0339	DvMF_1713	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: dde:Dde_1998 recombination factor protein RarA.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.473
DvMF_0339	topA	DvMF_0339	DvMF_2069	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: dde:Dde_1998 recombination factor protein RarA.	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.402
DvMF_0813	DvMF_0339	DvMF_0813	DvMF_0339	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: dde:Dde_1545 single-strand binding protein.	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: dde:Dde_1998 recombination factor protein RarA.	0.679
DvMF_0813	DvMF_1644	DvMF_0813	DvMF_1644	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: dde:Dde_1545 single-strand binding protein.	KEGG: pfl:PFL_3748 hypothetical protein.	0.970
DvMF_0813	DvMF_1758	DvMF_0813	DvMF_1758	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: dde:Dde_1545 single-strand binding protein.	PFAM: UvrD/REP helicase; KEGG: dde:Dde_3499 ATP-dependent DNA helicase UvrD.	0.582
DvMF_0813	DvMF_1938	DvMF_0813	DvMF_1938	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: dde:Dde_1545 single-strand binding protein.	KEGG: dde:Dde_0177 DNA polymerase III, delta prime subunit, putative.	0.748
DvMF_0813	DvMF_1967	DvMF_0813	DvMF_1967	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: dde:Dde_1545 single-strand binding protein.	PFAM: UvrD/REP helicase; KEGG: dde:Dde_3571 ATP-dependent DNA helicase UvrD.	0.609
DvMF_0813	DvMF_2082	DvMF_0813	DvMF_2082	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: dde:Dde_1545 single-strand binding protein.	KEGG: dde:Dde_0002 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain.	0.866
DvMF_0813	polA	DvMF_0813	DvMF_1713	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: dde:Dde_1545 single-strand binding protein.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.946
DvMF_0813	recD2	DvMF_0813	DvMF_1404	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: dde:Dde_1545 single-strand binding protein.	Helicase, RecD/TraA family; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.	0.627
DvMF_0813	topA	DvMF_0813	DvMF_2069	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: dde:Dde_1545 single-strand binding protein.	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.733
DvMF_1644	DvMF_0339	DvMF_1644	DvMF_0339	KEGG: pfl:PFL_3748 hypothetical protein.	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: dde:Dde_1998 recombination factor protein RarA.	0.971
DvMF_1644	DvMF_0813	DvMF_1644	DvMF_0813	KEGG: pfl:PFL_3748 hypothetical protein.	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: dde:Dde_1545 single-strand binding protein.	0.970
DvMF_1644	DvMF_1758	DvMF_1644	DvMF_1758	KEGG: pfl:PFL_3748 hypothetical protein.	PFAM: UvrD/REP helicase; KEGG: dde:Dde_3499 ATP-dependent DNA helicase UvrD.	0.986