STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DvMF_1685Hypothetical protein. (107 aa)    
Predicted Functional Partners:
DvMF_1684
Hypothetical protein; KEGG: cel:K09A9.6 K09A9.6a.
       0.675
DvMF_1682
KEGG: gsu:GSU2152 hypothetical protein.
       0.636
DvMF_1683
PFAM: protein of unknown function DUF1351; KEGG: cpy:Cphy_2989 hypothetical protein.
       0.636
DvMF_1680
Hypothetical protein.
       0.498
DvMF_1681
Hypothetical protein.
       0.498
DvMF_1686
Hypothetical protein.
       0.470
Your Current Organism:
Desulfovibrio vulgaris Miyazaki
NCBI taxonomy Id: 883
Other names: D. vulgaris str. 'Miyazaki F', Desulfovibrio vulgaris (strain Miyazaki), Desulfovibrio vulgaris str. 'Miyazaki F'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.