STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DvMF_1817KEGG: dde:Dde_0281 chemotaxis protein CheX, putative. (154 aa)    
Predicted Functional Partners:
DvMF_2010
PFAM: response regulator receiver; KEGG: dde:Dde_0384 response regulator receiver domain-containing protein.
 
 
 0.967
DvMF_2860
PFAM: response regulator receiver; KEGG: dde:Dde_0774 response regulator receiver domain-containing protein.
  
 
 0.949
DvMF_0226
PFAM: response regulator receiver; KEGG: dde:Dde_1694 response regulator receiver domain-containing protein.
   
 
 0.915
DvMF_2590
PFAM: response regulator receiver; KEGG: glo:Glov_1742 response regulator receiver protein.
   
 
 0.914
DvMF_0468
PFAM: response regulator receiver; KEGG: dde:Dde_2107 response regulator receiver domain-containing protein.
   
 
 0.907
DvMF_0775
PFAM: response regulator receiver; KEGG: dde:Dde_1576 response regulator receiver domain-containing protein.
   
 
 0.907
DvMF_2021
PFAM: response regulator receiver; CheW domain protein; KEGG: dde:Dde_0391 response regulator receiver (CheY-like) modulated CheW protein.
 
 
 
 0.642
DvMF_2939
PFAM: response regulator receiver; CheW domain protein; KEGG: dde:Dde_1493 response regulator receiver (CheY-like) modulated CheW protein.
 
 
 
 0.637
DvMF_2643
PFAM: response regulator receiver; CheW domain protein; KEGG: dde:Dde_3100 response regulator receiver (CheY-like) modulated CheW protein.
 
 
 
 0.635
DvMF_2755
PFAM: response regulator receiver; KEGG: dde:Dde_2769 multi-sensor hybrid histidine kinase.
  
 
 0.627
Your Current Organism:
Desulfovibrio vulgaris Miyazaki
NCBI taxonomy Id: 883
Other names: D. vulgaris str. 'Miyazaki F', Desulfovibrio vulgaris (strain Miyazaki), Desulfovibrio vulgaris str. 'Miyazaki F'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.