STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DvMF_1832PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; KEGG: dre:492779 zgc:101549 Pfam: DUF326 NeuB Phage_GPL SAF PROSITE: AFP_LIKE. (394 aa)    
Predicted Functional Partners:
DvMF_1846
PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: dde:Dde_3255 UDP-N-acetylglucosamine 2-epimerase.
 
 
 0.986
DvMF_1834
PFAM: acylneuraminate cytidylyltransferase; KEGG: vvu:VV1_0803 CMP-N-acetylneuraminic acid synthetase.
 
  
 0.966
DvMF_2638
PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: bvi:Bcep1808_4142 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
 
 0.935
DvMF_1844
PFAM: acylneuraminate cytidylyltransferase; KEGG: dde:Dde_3257 CMP-N-acetlyneuraminic acid synthetase.
  
 0.902
DvMF_1892
KEGG: hch:HCH_05265 CMP-N-acetylneuraminic acid synthetase.
 
  
 0.896
DvMF_1831
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; KEGG: tle:Tlet_2020 regulatory protein MarR.
  
  
 0.850
DvMF_1893
PFAM: acylneuraminate cytidylyltransferase; KEGG: lbl:LBL_1169 cytidylyltransferase.
 
  
 0.814
DvMF_1833
KEGG: ecp:ECP_3032 hypothetical protein.
  
  
 0.805
DvMF_1835
KEGG: sgr:SGR_4544 putative methyltransferase.
       0.785
DvMF_1836
TIGRFAM: methyltransferase FkbM family; PFAM: glycosyl transferase family 2; KEGG: mrd:Mrad2831_1576 glycosyl transferase family 2.
  
  
 0.603
Your Current Organism:
Desulfovibrio vulgaris Miyazaki
NCBI taxonomy Id: 883
Other names: D. vulgaris str. 'Miyazaki F', Desulfovibrio vulgaris (strain Miyazaki), Desulfovibrio vulgaris str. 'Miyazaki F'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.