STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DvMF_1843Acetyltransferase; KEGG: dde:Dde_3249 acetyltransferase. (222 aa)    
Predicted Functional Partners:
DvMF_0675
Acetyltransferase (isoleucine patch superfamily)-like protein; KEGG: scl:sce6563 hypothetical protein.
  
     0.640
DvMF_1842
PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: dde:Dde_0431 putative glycosyl/glycerophosphate transferase involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC.
 
  
 0.632
DvMF_2691
KEGG: dde:Dde_2931 mannose-1-phosphate guanylyltransferase (GDP); TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein.
  
  
 0.527
DvMF_1573
Undecaprenyl-phosphate galactose phosphotransferase, WbaP; KEGG: lip:LI0512 sugar transferases involved in lipopolysaccharide synthesis; TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase, WbaP; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
 
  
 0.525
DvMF_1831
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; KEGG: tle:Tlet_2020 regulatory protein MarR.
  
  
 0.523
DvMF_1846
PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: dde:Dde_3255 UDP-N-acetylglucosamine 2-epimerase.
  
  
 0.517
DvMF_1845
PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; KEGG: dde:Dde_3256 N-acetylneuraminate synthase.
  
  
 0.504
DvMF_1844
PFAM: acylneuraminate cytidylyltransferase; KEGG: dde:Dde_3257 CMP-N-acetlyneuraminic acid synthetase.
     
 0.495
DvMF_2692
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.461
DvMF_0690
TIGRFAM: sugar transferase, PEP-CTERM system associated; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: dde:Dde_0829 sugar transferase involved in lipopolysaccharide synthesis-like.
  
  
 0.438
Your Current Organism:
Desulfovibrio vulgaris Miyazaki
NCBI taxonomy Id: 883
Other names: D. vulgaris str. 'Miyazaki F', Desulfovibrio vulgaris (strain Miyazaki), Desulfovibrio vulgaris str. 'Miyazaki F'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.