Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DvMF_1923PFAM: glycosyl transferase family 2; KEGG: reu:Reut_A2635 glycosyl transferase, family 2. (383 aa)    
Predicted Functional Partners:
DvMF_3109
KEGG: dde:Dde_2420 dolichyl-phosphate-mannose-protein mannosyltransferase family protein.
 
  
 0.807
DvMF_1922
KEGG: rxy:Rxyl_1043 hypothetical protein.
       0.779
thrS
threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged L-seryl-tRNA(Thr).
   
 
  0.535
DvMF_0682
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gur:Gura_2343 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.490
DvMF_1924
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dde:Dde_0213 ATPase.
       0.478
DvMF_1925
PFAM: aminoglycoside phosphotransferase; KEGG: dde:Dde_0214 hypothetical protein.
       0.474
DvMF_2702
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ote:Oter_3246 ABC transporter related.
 
  
 0.422
DvMF_1891
Glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: lic:LIC12168 aspartate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.409
DvMF_1906
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: dde:Dde_3693 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis-like; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.409
DvMF_1911
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: dde:Dde_3697 aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.409
Your Current Organism:
Desulfovibrio vulgaris Miyazaki
NCBI taxonomy Id: 883
Other names: D. vulgaris str. 'Miyazaki F', Desulfovibrio vulgaris (strain Miyazaki), Desulfovibrio vulgaris str. 'Miyazaki F'
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.