Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DvMF_1928PFAM: FAD dependent oxidoreductase; KEGG: dde:Dde_0216 UDP-galactopyranose mutase. (460 aa)    
Predicted Functional Partners:
DvMF_0137
TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: dde:Dde_2187 UDP-galactose 4-epimerase.
   
  0.921
DvMF_1854
PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: dde:Dde_0427 NAD-dependent epimerase/dehydratase family protein.
 
  
 0.919
DvMF_1899
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: dde:Dde_3686 NAD-dependent epimerase/dehydratase family protein.
 
  
 0.919
DvMF_2922
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mrd:Mrad2831_1187 NAD-dependent epimerase/dehydratase.
    
 0.904
DvMF_1927
PFAM: glycosyl transferase family 2; KEGG: dde:Dde_0215 glycosyl transferase, group 2 family protein.
 
    0.733
DvMF_1929
Peptidase M24; PFAM: creatinase; peptidase M24; KEGG: dde:Dde_0217 M24 family peptidase.
  
    0.712
DvMF_2767
TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: dde:Dde_2837 uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase.
  
  
 0.687
DvMF_2857
PFAM: phosphoribosyltransferase; KEGG: lip:LI1111 predicted amidophosphoribosyltransferases.
  
    0.686
DvMF_2902
Porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase; KEGG: dde:Dde_2576 delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
  
  
 0.597
DvMF_3144
PFAM: glycosyl transferase family 2; KEGG: dde:Dde_1487 glycosyl transferase, group 2 family protein.
 
    0.543
Your Current Organism:
Desulfovibrio vulgaris Miyazaki
NCBI taxonomy Id: 883
Other names: D. vulgaris str. 'Miyazaki F', Desulfovibrio vulgaris (strain Miyazaki), Desulfovibrio vulgaris str. 'Miyazaki F'
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