STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DvMF_1956PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: pth:PTH_2604 aldehyde:ferredoxin oxidoreductase. (575 aa)    
Predicted Functional Partners:
DvMF_2671
PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: dde:Dde_2943 aldehyde:ferredoxin oxidoreductase, tungsten-containing, putative.
  
  
 
0.928
DvMF_2801
Hydroxypyruvate reductase; PFAM: MOFRL domain protein; KEGG: dde:Dde_2751 glycerate 2-kinase.
     
  0.900
DvMF_1955
PFAM: thiamineS protein; KEGG: dde:Dde_2458 hypothetical protein.
 
     0.885
DvMF_1954
KEGG: pth:PTH_1468 hypothetical protein.
 
   
 0.820
DvMF_1797
Molybdenum cofactor synthesis domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
   
 0.760
DvMF_2780
KEGG: dde:Dde_0234 ABC transporter, periplasmic substrate-binding protein.
 
   
 0.728
DvMF_2763
KEGG: mag:amb3043 ABC-type tungstate transport system, permease component.
 
   
 0.724
DvMF_2672
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dde:Dde_2944 iron-sulfur cluster-binding protein.
 
 
 0.680
DvMF_2781
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_0233 ABC transporter, permease protein.
 
   
 0.677
DvMF_0445
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dde:Dde_2085 iron-sulfur cluster-binding protein.
   
 
 0.650
Your Current Organism:
Desulfovibrio vulgaris Miyazaki
NCBI taxonomy Id: 883
Other names: D. vulgaris str. 'Miyazaki F', Desulfovibrio vulgaris (strain Miyazaki), Desulfovibrio vulgaris str. 'Miyazaki F'
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