Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DvMF_2068 | DvMF_2308 | DvMF_2068 | DvMF_2308 | PFAM: peptidase M48 Ste24p; KEGG: dde:Dde_0107 putative lipoprotein. | KEGG: dde:Dde_0335 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); Belongs to the SIS family. GutQ/KpsF subfamily. | 0.415 |
| DvMF_2068 | DvMF_2365 | DvMF_2068 | DvMF_2365 | PFAM: peptidase M48 Ste24p; KEGG: dde:Dde_0107 putative lipoprotein. | PFAM: outer membrane efflux protein; KEGG: dde:Dde_3627 outer membrane efflux protein. | 0.433 |
| DvMF_2068 | DvMF_3157 | DvMF_2068 | DvMF_3157 | PFAM: peptidase M48 Ste24p; KEGG: dde:Dde_0107 putative lipoprotein. | PFAM: Peptidase M23; KEGG: dde:Dde_1436 M24/M37 family peptidase. | 0.627 |
| DvMF_2068 | aroC | DvMF_2068 | DvMF_1408 | PFAM: peptidase M48 Ste24p; KEGG: dde:Dde_0107 putative lipoprotein. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.636 |
| DvMF_2068 | polA | DvMF_2068 | DvMF_1713 | PFAM: peptidase M48 Ste24p; KEGG: dde:Dde_0107 putative lipoprotein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.423 |
| DvMF_2068 | topA | DvMF_2068 | DvMF_2069 | PFAM: peptidase M48 Ste24p; KEGG: dde:Dde_0107 putative lipoprotein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.603 |
| DvMF_2308 | DvMF_2068 | DvMF_2308 | DvMF_2068 | KEGG: dde:Dde_0335 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); Belongs to the SIS family. GutQ/KpsF subfamily. | PFAM: peptidase M48 Ste24p; KEGG: dde:Dde_0107 putative lipoprotein. | 0.415 |
| DvMF_2365 | DvMF_2068 | DvMF_2365 | DvMF_2068 | PFAM: outer membrane efflux protein; KEGG: dde:Dde_3627 outer membrane efflux protein. | PFAM: peptidase M48 Ste24p; KEGG: dde:Dde_0107 putative lipoprotein. | 0.433 |
| DvMF_3157 | DvMF_2068 | DvMF_3157 | DvMF_2068 | PFAM: Peptidase M23; KEGG: dde:Dde_1436 M24/M37 family peptidase. | PFAM: peptidase M48 Ste24p; KEGG: dde:Dde_0107 putative lipoprotein. | 0.627 |
| aroC | DvMF_2068 | DvMF_1408 | DvMF_2068 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | PFAM: peptidase M48 Ste24p; KEGG: dde:Dde_0107 putative lipoprotein. | 0.636 |
| aroC | topA | DvMF_1408 | DvMF_2069 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.512 |
| polA | DvMF_2068 | DvMF_1713 | DvMF_2068 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | PFAM: peptidase M48 Ste24p; KEGG: dde:Dde_0107 putative lipoprotein. | 0.423 |
| polA | topA | DvMF_1713 | DvMF_2069 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.855 |
| topA | DvMF_2068 | DvMF_2069 | DvMF_2068 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | PFAM: peptidase M48 Ste24p; KEGG: dde:Dde_0107 putative lipoprotein. | 0.603 |
| topA | aroC | DvMF_2069 | DvMF_1408 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.512 |
| topA | polA | DvMF_2069 | DvMF_1713 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.855 |