STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DvMF_2223Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. (120 aa)    
Predicted Functional Partners:
DvMF_2917
PFAM: phosphatidate cytidylyltransferase; KEGG: dde:Dde_1125 phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
 0.920
DvMF_0337
PFAM: phospholipid/glycerol acyltransferase; KEGG: dde:Dde_2001 phospholipid/glycerol acyltransferase.
    
 0.913
DvMF_2720
KEGG: sat:SYN_00794 phosphatidylserine/phosphatidylglycerophosphate related protein.
    
 0.911
DvMF_0506
PFAM: PGAP1 family protein; KEGG: dde:Dde_1837 acetyltransferase and hydrolase with the alpha/beta hydrolase fold-like.
     
 0.910
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.805
DvMF_0811
PFAM: FAD dependent oxidoreductase; KEGG: dde:Dde_0408 glycerol-3-phosphate dehydrogenase, FAD-dependent; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
    
  0.803
DvMF_1126
PFAM: FAD dependent oxidoreductase; KEGG: tpe:Tpen_1127 FAD dependent oxidoreductase.
    
  0.803
recO
Recombination protein O RecO; Involved in DNA repair and RecF pathway recombination.
  
  
 0.532
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
  
    0.509
DvMF_1335
PFAM: protein of unknown function DUF615; KEGG: dde:Dde_1395 hypothetical protein; Belongs to the UPF0307 family.
  
     0.466
Your Current Organism:
Desulfovibrio vulgaris Miyazaki
NCBI taxonomy Id: 883
Other names: D. vulgaris str. 'Miyazaki F', Desulfovibrio vulgaris (strain Miyazaki), Desulfovibrio vulgaris str. 'Miyazaki F'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.