STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DvMF_2289KEGG: dde:Dde_0351 flagellar assembly protein FliH, putative. (254 aa)    
Predicted Functional Partners:
DvMF_2288
PFAM: flagellar motor switch protein FliG; KEGG: dde:Dde_0352 flagellar motor switch protein FliG.
  
 
 0.972
DvMF_2287
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.969
DvMF_2290
Flagellar protein export ATPase FliI; KEGG: dde:Dde_0350 ATPase FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase.
  
 
 0.961
DvMF_1393
TIGRFAM: flagellar export protein FliJ; KEGG: dde:Dde_2705 putative flagellar FliJ protein.
 
  
 0.948
DvMF_2284
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
  
 0.930
DvMF_0248
PFAM: flagellar hook-length control protein; KEGG: dde:Dde_1713 hypothetical protein.
 
  
 0.925
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
  
 
 0.916
DvMF_2285
TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: dde:Dde_0355 flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
  
  
 0.911
DvMF_2435
KEGG: lip:LI0540 type III secretion system ATPase; TIGRFAM: ATPase, FliI/YscN family; type III secretion apparatus H+-transporting two-sector ATPase; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase.
  
 
 0.910
DvMF_2519
TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; KEGG: dde:Dde_3157 FlgA family protein.
 
  
 0.908
Your Current Organism:
Desulfovibrio vulgaris Miyazaki
NCBI taxonomy Id: 883
Other names: D. vulgaris str. 'Miyazaki F', Desulfovibrio vulgaris (strain Miyazaki), Desulfovibrio vulgaris str. 'Miyazaki F'
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.