STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DvMF_2323KEGG: pvi:Cvib_0830 hypothetical protein. (359 aa)    
Predicted Functional Partners:
DvMF_2619
KEGG: cpb:Cphamn1_1759 ferredoxin, 2Fe-2S.
 
     0.601
DvMF_2009
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.522
DvMF_2212
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.522
DvMF_2288
PFAM: flagellar motor switch protein FliG; KEGG: dde:Dde_0352 flagellar motor switch protein FliG.
    
   0.522
DvMF_2984
Hypothetical protein; KEGG: rno:84352 collagen, type I, alpha 2.
    
   0.522
DvMF_2259
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: glo:Glov_1037 ABC transporter related.
  
     0.519
DvMF_2260
PFAM: cobalamin synthesis protein P47K; KEGG: cte:CT1756 hypothetical protein.
  
     0.494
DvMF_0819
PFAM: OmpA/MotB domain protein; KEGG: dde:Dde_1539 MotB protein, putative.
    
   0.463
DvMF_1084
PFAM: OmpA/MotB domain protein; KEGG: lip:LI0483 flagellar motor protein.
    
   0.463
DvMF_2210
PFAM: OmpA/MotB domain protein; KEGG: dde:Dde_3588 OmpA family protein.
    
   0.463
Your Current Organism:
Desulfovibrio vulgaris Miyazaki
NCBI taxonomy Id: 883
Other names: D. vulgaris str. 'Miyazaki F', Desulfovibrio vulgaris (strain Miyazaki), Desulfovibrio vulgaris str. 'Miyazaki F'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.