STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DvMF_2468KEGG: spt:SPA2121 molybdopterin-containing oxidoreductase membrane anchor subunit. (265 aa)    
Predicted Functional Partners:
DvMF_2470
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sea:SeAg_B0650 molybdopterin-containing oxidoreductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.949
DvMF_2471
PFAM: cytoplasmic chaperone TorD family protein; KEGG: stm:STM0610 putative anaerobic dehydrogenase component.
 
  
 0.949
DvMF_2469
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sew:SeSA_A0770 molybdopterin-containing oxidoreductase iron-sulfur subunit.
 
  
 0.849
DvMF_0931
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sea:SeAg_B0650 molybdopterin-containing oxidoreductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.810
DvMF_0930
PFAM: cytoplasmic chaperone TorD family protein; KEGG: spq:SPAB_02952 hypothetical protein.
 
  
 0.789
DvMF_0929
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; KEGG: pca:Pcar_0664 putative response regulator protein.
 
     0.776
DvMF_1610
KEGG: sth:STH2330 anaerobic dimethyl sulfoxide reductase subunit C.
  
     0.732
DvMF_0164
KEGG: mms:mma_3662 hypothetical protein.
  
     0.662
DvMF_2467
KEGG: sco:SCO3115 hypothetical protein.
       0.598
DvMF_0166
Formate dehydrogenase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mta:Moth_0450 formate dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.546
Your Current Organism:
Desulfovibrio vulgaris Miyazaki
NCBI taxonomy Id: 883
Other names: D. vulgaris str. 'Miyazaki F', Desulfovibrio vulgaris (strain Miyazaki), Desulfovibrio vulgaris str. 'Miyazaki F'
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