STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DvMF_2636KEGG: dde:Dde_3117 hypothetical protein. (289 aa)    
Predicted Functional Partners:
DvMF_2667
KEGG: dde:Dde_2939 hypothetical protein.
  
     0.746
DvMF_0815
KEGG: dde:Dde_1543 hypothetical protein.
  
     0.738
DvMF_0335
KEGG: dde:Dde_2003 hypothetical protein.
  
     0.721
DvMF_0816
PFAM: acetyl-CoA carboxylase alpha subunit; KEGG: dde:Dde_1542 acetyl-CoA carboxylase.
  
     0.692
DvMF_2642
KEGG: dde:Dde_3102 hypothetical protein.
  
     0.653
DvMF_0113
KEGG: dde:Dde_2213 hypothetical protein.
  
     0.581
DvMF_0972
KEGG: dde:Dde_2610 hypothetical protein.
  
     0.565
DvMF_2009
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
     0.563
DvMF_2530
KEGG: dde:Dde_0292 hypothetical protein.
  
     0.546
DvMF_0892
KEGG: dde:Dde_2398 hypothetical protein.
  
     0.521
Your Current Organism:
Desulfovibrio vulgaris Miyazaki
NCBI taxonomy Id: 883
Other names: D. vulgaris str. 'Miyazaki F', Desulfovibrio vulgaris (strain Miyazaki), Desulfovibrio vulgaris str. 'Miyazaki F'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.