node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DvMF_0258 | rnhA | DvMF_0258 | DvMF_2669 | PFAM: protein of unknown function DUF164; KEGG: dde:Dde_1728 hypothetical protein. | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.693 |
DvMF_0813 | DvMF_1644 | DvMF_0813 | DvMF_1644 | TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: dde:Dde_1545 single-strand binding protein. | KEGG: pfl:PFL_3748 hypothetical protein. | 0.829 |
DvMF_0813 | polA | DvMF_0813 | DvMF_1713 | TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: dde:Dde_1545 single-strand binding protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.795 |
DvMF_0813 | rnhA | DvMF_0813 | DvMF_2669 | TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: dde:Dde_1545 single-strand binding protein. | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.740 |
DvMF_0813 | topA | DvMF_0813 | DvMF_2069 | TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: dde:Dde_1545 single-strand binding protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.982 |
DvMF_1644 | DvMF_0813 | DvMF_1644 | DvMF_0813 | KEGG: pfl:PFL_3748 hypothetical protein. | TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: dde:Dde_1545 single-strand binding protein. | 0.829 |
DvMF_1644 | DvMF_2882 | DvMF_1644 | DvMF_2882 | KEGG: pfl:PFL_3748 hypothetical protein. | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.877 |
DvMF_1644 | polA | DvMF_1644 | DvMF_1713 | KEGG: pfl:PFL_3748 hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.987 |
DvMF_1644 | rnhA | DvMF_1644 | DvMF_2669 | KEGG: pfl:PFL_3748 hypothetical protein. | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.850 |
DvMF_1644 | topA | DvMF_1644 | DvMF_2069 | KEGG: pfl:PFL_3748 hypothetical protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.988 |
DvMF_2285 | rnhA | DvMF_2285 | DvMF_2669 | TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: dde:Dde_0355 flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.576 |
DvMF_2670 | DvMF_2672 | DvMF_2670 | DvMF_2672 | KEGG: dde:Dde_2942 hypothetical protein. | PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dde:Dde_2944 iron-sulfur cluster-binding protein. | 0.773 |
DvMF_2670 | rnhA | DvMF_2670 | DvMF_2669 | KEGG: dde:Dde_2942 hypothetical protein. | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.574 |
DvMF_2672 | DvMF_2670 | DvMF_2672 | DvMF_2670 | PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dde:Dde_2944 iron-sulfur cluster-binding protein. | KEGG: dde:Dde_2942 hypothetical protein. | 0.773 |
DvMF_2672 | rnhA | DvMF_2672 | DvMF_2669 | PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dde:Dde_2944 iron-sulfur cluster-binding protein. | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.563 |
DvMF_2672 | topA | DvMF_2672 | DvMF_2069 | PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dde:Dde_2944 iron-sulfur cluster-binding protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.493 |
DvMF_2882 | DvMF_1644 | DvMF_2882 | DvMF_1644 | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | KEGG: pfl:PFL_3748 hypothetical protein. | 0.877 |
DvMF_2882 | polA | DvMF_2882 | DvMF_1713 | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.763 |
DvMF_2882 | rnhA | DvMF_2882 | DvMF_2669 | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.782 |
DvMF_2882 | topA | DvMF_2882 | DvMF_2069 | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.462 |