Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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DvMF_2688PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dde:Dde_2934 molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit, putative. (255 aa)    
Predicted Functional Partners:
DvMF_2689
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: dde:Dde_2933 molybdopterin oxidoreductase, molybdopterin-binding subunit, putative; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 0.993
DvMF_2690
KEGG: dde:Dde_2932 hypothetical protein.
 
 
 0.972
DvMF_2687
PFAM: Polysulphide reductase NrfD; KEGG: dde:Dde_2935 molybdopterin oxidoreductase, transmembrane subunit, putative.
 
 
 0.963
DvMF_0643
Contains selenocysteine; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sfu:Sfum_3510 formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.839
DvMF_0646
KEGG: dde:Dde_3513 formate dehydrogenase alpha subunit; TIGRFAM: formate dehydrogenase, alpha subunit; Contains selenocysteine; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region.
  
 0.839
DvMF_1217
KEGG: dde:Dde_0813 formate dehydrogenase alpha subunit; TIGRFAM: formate dehydrogenase, alpha subunit; Contains selenocysteine; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.839
DvMF_2533
Contains selenocysteine; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: dde:Dde_0813 formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.820
DvMF_0445
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dde:Dde_2085 iron-sulfur cluster-binding protein.
 
  
  0.816
DvMF_0066
PFAM: Polysulphide reductase NrfD; KEGG: dde:Dde_2275 reductase, transmembrane subunit, putative.
 
 
 0.788
DvMF_0320
Formate dehydrogenase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: dde:Dde_1076 thiosulfate reductase, putative; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.786
Your Current Organism:
Desulfovibrio vulgaris Miyazaki
NCBI taxonomy Id: 883
Other names: D. vulgaris str. 'Miyazaki F', Desulfovibrio vulgaris (strain Miyazaki), Desulfovibrio vulgaris str. 'Miyazaki F'
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