Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DvMF_3192PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: rru:Rru_A1422 NADH ubiquinone oxidoreductase, 20 kDa subunit. (146 aa)    
Predicted Functional Partners:
DvMF_3189
NADH dehydrogenase (quinone); PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: chy:CHY_1827 carbon monoxide-induced hydrogenase, large subunit.
 0.996
DvMF_3191
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: chy:CHY_1829 carbon monoxide-induced hydrogenase, iron-sulfur cluster-binding subunit.
 0.996
DvMF_3193
PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: chy:CHY_1831 carbon monoxide-induced hydrogenase, CooK subunit.
 
 0.996
DvMF_3194
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: chy:CHY_1832 carbon monoxide-induced hydrogenase, membrane anchor subunit.
 
 0.992
DvMF_1522
PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: tte:TTE0127 NADH:ubiquinone oxidoreductase 49 kD subunit 7.
 0.986
DvMF_1519
PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: tte:TTE0124 NADH:ubiquinone oxidoreductase subunit 1 (chain H).
 
 0.982
DvMF_3190
PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: chy:CHY_1828 carbon monoxide-induced hydrogenase, CooU subunit.
 
  
 0.969
DvMF_1523
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tte:TTE0128 formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I).
 
 0.933
DvMF_3187
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rru:Rru_A1426 4Fe-4S ferredoxin, iron-sulfur binding.
  
 0.930
DvMF_1603
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: ote:Oter_0753 NADH dehydrogenase (quinone).
  
 0.921
Your Current Organism:
Desulfovibrio vulgaris Miyazaki
NCBI taxonomy Id: 883
Other names: D. vulgaris str. 'Miyazaki F', Desulfovibrio vulgaris (strain Miyazaki), Desulfovibrio vulgaris str. 'Miyazaki F'
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.