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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKS38187.1LolC/E family lipoprotein releasing system, transmembrane protein. (422 aa)    
Predicted Functional Partners:
lolD
Lipoprotein-releasing system ATP-binding protein LolD 1; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
 0.999
EKS41866.1
Hypothetical protein.
  
 0.996
EKS34673.1
Hypothetical protein.
 
 
 
 0.974
EKS38173.1
Outer membrane protein assembly complex, YaeT protein.
 
   
 0.819
EKS41612.1
Hypothetical protein.
    
 0.784
pal
Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 
 0.773
EKS38279.1
Hypothetical protein.
  
  
 0.765
tolQ
Protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
    0.765
tolB
Protein tolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
  
 0.764
EKS39450.1
Hypothetical protein.
   
 0.763
Your Current Organism:
Afipia broomeae
NCBI taxonomy Id: 883078
Other names: A. broomeae ATCC 49717, Afipia broomeae ATCC 49717, Afipia broomeae B-91-007286, Afipia broomeae F186
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