Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EKU93176.1 | EKU94030.1 | HMPREF9698_01337 | HMPREF9698_00435 | Ornithine carbamoyltransferase, catabolic; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.672 |
| EKU93176.1 | EKU94145.1 | HMPREF9698_01337 | HMPREF9698_00177 | Ornithine carbamoyltransferase, catabolic; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Hypothetical protein. | 0.408 |
| EKU93176.1 | EKU94346.1 | HMPREF9698_01337 | HMPREF9698_00074 | Ornithine carbamoyltransferase, catabolic; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | ArgE/DapE family peptidase. | 0.568 |
| EKU93176.1 | lysA | HMPREF9698_01337 | HMPREF9698_00176 | Ornithine carbamoyltransferase, catabolic; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.604 |
| EKU93411.1 | EKU94030.1 | HMPREF9698_01159 | HMPREF9698_00435 | Hypothetical protein. | 4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.654 |
| EKU93411.1 | EKU94145.1 | HMPREF9698_01159 | HMPREF9698_00177 | Hypothetical protein. | Hypothetical protein. | 0.642 |
| EKU93411.1 | EKU94182.1 | HMPREF9698_01159 | HMPREF9698_00214 | Hypothetical protein. | Chorismate mutase. | 0.912 |
| EKU93411.1 | EKU94346.1 | HMPREF9698_01159 | HMPREF9698_00074 | Hypothetical protein. | ArgE/DapE family peptidase. | 0.456 |
| EKU93411.1 | gshAB | HMPREF9698_01159 | HMPREF9698_00156 | Hypothetical protein. | Glutamate-cysteine ligase/gamma-glutamylcysteine synthetase; Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine; In the N-terminal section; belongs to the glutamate--cysteine ligase type 1 family. Type 2 subfamily. | 0.846 |
| EKU93411.1 | lysA | HMPREF9698_01159 | HMPREF9698_00176 | Hypothetical protein. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.407 |
| EKU93447.1 | EKU94346.1 | HMPREF9698_00979 | HMPREF9698_00074 | Dihydroorotase, multifunctional complex type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | ArgE/DapE family peptidase. | 0.483 |
| EKU93447.1 | pyrD | HMPREF9698_00979 | HMPREF9698_00978 | Dihydroorotase, multifunctional complex type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate. | 0.999 |
| EKU94030.1 | EKU93176.1 | HMPREF9698_00435 | HMPREF9698_01337 | 4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Ornithine carbamoyltransferase, catabolic; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.672 |
| EKU94030.1 | EKU93411.1 | HMPREF9698_00435 | HMPREF9698_01159 | 4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Hypothetical protein. | 0.654 |
| EKU94030.1 | EKU94145.1 | HMPREF9698_00435 | HMPREF9698_00177 | 4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Hypothetical protein. | 0.745 |
| EKU94030.1 | EKU94346.1 | HMPREF9698_00435 | HMPREF9698_00074 | 4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | ArgE/DapE family peptidase. | 0.511 |
| EKU94030.1 | gshAB | HMPREF9698_00435 | HMPREF9698_00156 | 4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Glutamate-cysteine ligase/gamma-glutamylcysteine synthetase; Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine; In the N-terminal section; belongs to the glutamate--cysteine ligase type 1 family. Type 2 subfamily. | 0.830 |
| EKU94030.1 | lysA | HMPREF9698_00435 | HMPREF9698_00176 | 4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.478 |
| EKU94142.1 | EKU94145.1 | HMPREF9698_00174 | HMPREF9698_00177 | Amidohydrolase. | Hypothetical protein. | 0.892 |
| EKU94142.1 | EKU94346.1 | HMPREF9698_00174 | HMPREF9698_00074 | Amidohydrolase. | ArgE/DapE family peptidase. | 0.706 |
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