STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU94316.1Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. (327 aa)    
Predicted Functional Partners:
EKU94317.1
Rod shape-determining protein MreD.
  
 
 0.989
EKU94318.1
Hypothetical protein; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization.
  
  
 0.953
EKU94046.1
Hypothetical protein.
 
 
 0.942
EKU94380.1
Hypothetical protein.
 
 
 0.848
EKU93704.1
Hypothetical protein; Belongs to the SEDS family.
 
  
 0.778
EKU94313.1
DNA repair protein RadC; Belongs to the UPF0758 family.
  
  
 0.734
EKU94415.1
Hypothetical protein.
 
 
 
 0.692
EKU93479.1
Hypothetical protein.
  
    0.659
murC
UDP-N-acetylmuramate-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
  
 0.594
murG
Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
 
  
 0.574
Your Current Organism:
Alloiococcus otitis
NCBI taxonomy Id: 883081
Other names: A. otitis ATCC 51267, Alloiococcus otitis ATCC 51267
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.