STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU94186.1Glycine betaine/L-proline transport ATP binding subunit. (393 aa)    
Predicted Functional Partners:
EKU93589.1
Hypothetical protein.
 0.999
EKU94187.1
Hypothetical protein.
 0.996
EKU94188.1
Hypothetical protein.
 0.994
EKU94189.1
Hypothetical protein.
 0.994
EKU93108.1
Hypothetical protein.
 
     
0.894
EKU93315.1
Hypothetical protein.
 
      0.893
EKU93109.1
Hypothetical protein.
 
     
0.851
EKU94166.1
Hypothetical protein.
 
      0.843
EKU93724.1
Hypothetical protein.
 
     
0.836
EKU93719.1
Hypothetical protein.
 
     
0.790
Your Current Organism:
Alloiococcus otitis
NCBI taxonomy Id: 883081
Other names: A. otitis ATCC 51267, Alloiococcus otitis ATCC 51267
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