STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU94013.1Hypothetical protein. (159 aa)    
Predicted Functional Partners:
EKU93787.1
Hypothetical protein.
  
     0.756
EKU93826.1
Hypothetical protein.
  
     0.738
asnS
asparaginyl-tRNA synthetase.
       0.698
EKU93788.1
Hypothetical protein.
  
     0.665
EKU94011.1
DnaD and phage-associated domain-containing protein.
 
     0.644
EKU93614.1
Hypothetical protein.
  
     0.637
dinG
Exonuclease, DNA polymerase III, epsilon subunit; 3'-5' exonuclease.
  
    0.634
EKU94374.1
Hypothetical protein.
  
     0.627
EKU94356.1
Hypothetical protein.
  
     0.557
EKU93633.1
Hypothetical protein.
  
    0.549
Your Current Organism:
Alloiococcus otitis
NCBI taxonomy Id: 883081
Other names: A. otitis ATCC 51267, Alloiococcus otitis ATCC 51267
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.