STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU93947.1Hypothetical protein; Belongs to the peptidase S11 family. (438 aa)    
Predicted Functional Partners:
EKU93993.1
1A family penicillin-binding protein.
  
 
 0.915
EKU94436.1
1A family penicillin-binding protein.
  
 
 0.912
EKU94343.1
Hypothetical protein.
     
 0.909
EKU93024.1
Hypothetical protein.
   
 
 0.900
EKU93948.1
Hypothetical protein.
  
    0.800
EKU94304.1
Hypothetical protein.
   
 
 0.769
EKU94046.1
Hypothetical protein.
 
 
 0.696
EKU94380.1
Hypothetical protein.
 
 
 0.682
EKU94208.1
Hypothetical protein.
   
 
 0.667
EKU93118.1
Hypothetical protein.
  
 
 0.628
Your Current Organism:
Alloiococcus otitis
NCBI taxonomy Id: 883081
Other names: A. otitis ATCC 51267, Alloiococcus otitis ATCC 51267
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.