STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU93922.1Hypothetical protein. (471 aa)    
Predicted Functional Partners:
EKU93813.1
Hypothetical protein.
 
 
 0.925
EKU93812.1
Hypothetical protein.
 
 
 0.913
EKU94363.1
Phosphocarrier protein HPr.
    
  0.793
EKU93900.1
Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
  0.629
EKU93801.1
Hypothetical protein.
   
 
  0.629
EKU92976.1
Hypothetical protein.
   
 
  0.629
EKU94092.1
Hypothetical protein.
   
 
  0.618
EKU93943.1
Hypothetical protein.
   
 
  0.618
EKU93917.1
Hypothetical protein.
   
    0.599
EKU93818.1
Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
    0.575
Your Current Organism:
Alloiococcus otitis
NCBI taxonomy Id: 883081
Other names: A. otitis ATCC 51267, Alloiococcus otitis ATCC 51267
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.