STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU93008.1Hypothetical protein. (316 aa)    
Predicted Functional Partners:
EKU92969.1
Hypothetical protein.
 
 
 0.965
EKU94048.1
Hypothetical protein.
  
   0.811
EKU93007.1
Sigma-70 family RNA polymerase sigma factor.
 
    0.809
EKU93923.1
rib/alpha/Esp surface antigen.
  
 
  0.756
EKU93492.1
Hypothetical protein.
  
 
 0.671
EKU93493.1
Hypothetical protein.
  
 
 0.671
EKU93020.1
Hypothetical protein.
  
 
 0.671
EKU94304.1
Hypothetical protein.
 
  
 
0.596
EKU93118.1
Hypothetical protein.
 
  
 0.526
EKU93026.1
Hypothetical protein.
 
  
 0.493
Your Current Organism:
Alloiococcus otitis
NCBI taxonomy Id: 883081
Other names: A. otitis ATCC 51267, Alloiococcus otitis ATCC 51267
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.