STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKB59309.1Hypothetical protein. (315 aa)    
Predicted Functional Partners:
EKB59314.1
Hypothetical protein.
 
 0.999
EKB59315.1
Hypothetical protein.
 
 0.998
EKB58051.1
Hypothetical protein.
 
 
   0.864
EKB59308.1
Hypothetical protein.
       0.778
EKB59307.1
Hypothetical protein.
       0.597
EKB55967.1
Hypothetical protein.
  
     0.555
EKB59284.1
Outer membrane protein assembly complex, YaeT protein.
 
    0.531
EKB54234.1
Hypothetical protein.
  
     0.482
folD
Hypothetical protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
       0.476
pgi
Hypothetical protein; Belongs to the GPI family.
       0.448
Your Current Organism:
Bergeyella zoohelcum
NCBI taxonomy Id: 883096
Other names: B. zoohelcum ATCC 43767, Bergeyella zoohelcum ATCC 43767
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.