STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKB56671.1Hypothetical protein. (479 aa)    
Predicted Functional Partners:
EKB56722.1
Hypothetical protein.
  
     0.730
EKB56670.1
methylated-DNA-[protein]-cysteine S-methyltransferase.
       0.697
EKB55896.1
Hypothetical protein.
  
   0.633
EKB56672.1
Hypothetical protein.
       0.574
EKB54260.1
Hypothetical protein.
  
   0.539
EKB57610.1
Hypothetical protein.
  
 
   0.453
EKB59560.1
Hypothetical protein; Belongs to the peptidase M17 family.
 
 
  0.449
EKB57835.1
Hypothetical protein; Similar to Porphyromonas gingivalis paralogous family protein.
  
     0.441
EKB54067.1
Hypothetical protein.
  
     0.429
EKB54004.1
Hypothetical protein.
  
     0.429
Your Current Organism:
Bergeyella zoohelcum
NCBI taxonomy Id: 883096
Other names: B. zoohelcum ATCC 43767, Bergeyella zoohelcum ATCC 43767
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.