Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EKB54164.1 | EKB55994.1 | HMPREF9699_01976 | HMPREF9699_01639 | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | protein-L-isoaspartate O-methyltransferase. | 0.423 |
| EKB54164.1 | ruvA | HMPREF9699_01976 | HMPREF9699_01640 | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.451 |
| EKB55993.1 | EKB55994.1 | HMPREF9699_01638 | HMPREF9699_01639 | Hypothetical protein. | protein-L-isoaspartate O-methyltransferase. | 0.470 |
| EKB55994.1 | EKB54164.1 | HMPREF9699_01639 | HMPREF9699_01976 | protein-L-isoaspartate O-methyltransferase. | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.423 |
| EKB55994.1 | EKB55993.1 | HMPREF9699_01639 | HMPREF9699_01638 | protein-L-isoaspartate O-methyltransferase. | Hypothetical protein. | 0.470 |
| EKB55994.1 | EKB55996.1 | HMPREF9699_01639 | HMPREF9699_01641 | protein-L-isoaspartate O-methyltransferase. | Hypothetical protein. | 0.532 |
| EKB55994.1 | EKB55997.1 | HMPREF9699_01639 | HMPREF9699_01642 | protein-L-isoaspartate O-methyltransferase. | Hypothetical protein. | 0.411 |
| EKB55994.1 | EKB59291.1 | HMPREF9699_01639 | HMPREF9699_00227 | protein-L-isoaspartate O-methyltransferase. | Hypothetical protein. | 0.457 |
| EKB55994.1 | ruvA | HMPREF9699_01639 | HMPREF9699_01640 | protein-L-isoaspartate O-methyltransferase. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.585 |
| EKB55994.1 | surE | HMPREF9699_01639 | HMPREF9699_01113 | protein-L-isoaspartate O-methyltransferase. | 5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.762 |
| EKB55996.1 | EKB55994.1 | HMPREF9699_01641 | HMPREF9699_01639 | Hypothetical protein. | protein-L-isoaspartate O-methyltransferase. | 0.532 |
| EKB55996.1 | EKB55997.1 | HMPREF9699_01641 | HMPREF9699_01642 | Hypothetical protein. | Hypothetical protein. | 0.580 |
| EKB55996.1 | ruvA | HMPREF9699_01641 | HMPREF9699_01640 | Hypothetical protein. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.867 |
| EKB55997.1 | EKB55994.1 | HMPREF9699_01642 | HMPREF9699_01639 | Hypothetical protein. | protein-L-isoaspartate O-methyltransferase. | 0.411 |
| EKB55997.1 | EKB55996.1 | HMPREF9699_01642 | HMPREF9699_01641 | Hypothetical protein. | Hypothetical protein. | 0.580 |
| EKB55997.1 | ruvA | HMPREF9699_01642 | HMPREF9699_01640 | Hypothetical protein. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.580 |
| EKB59291.1 | EKB55994.1 | HMPREF9699_00227 | HMPREF9699_01639 | Hypothetical protein. | protein-L-isoaspartate O-methyltransferase. | 0.457 |
| ruvA | EKB54164.1 | HMPREF9699_01640 | HMPREF9699_01976 | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.451 |
| ruvA | EKB55994.1 | HMPREF9699_01640 | HMPREF9699_01639 | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | protein-L-isoaspartate O-methyltransferase. | 0.585 |
| ruvA | EKB55996.1 | HMPREF9699_01640 | HMPREF9699_01641 | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | Hypothetical protein. | 0.867 |
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