STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKB55552.1Hypothetical protein. (177 aa)    
Predicted Functional Partners:
EKB57500.1
Hypothetical protein.
     
 0.808
EKB55553.1
Hypothetical protein.
       0.780
EKB59613.1
Hypothetical protein.
     
 0.514
EKB55834.1
Hypothetical protein.
  
 
 0.487
EKB58038.1
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit.
    
 0.442
EKB55551.1
Protease Do.
       0.442
EKB55486.1
Riboflavin biosynthesis protein RibF; Belongs to the ribF family.
    
 0.439
EKB56554.1
Hypothetical protein.
    
 0.431
msrA
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.427
EKB55555.1
Hypothetical protein.
 
     0.425
Your Current Organism:
Bergeyella zoohelcum
NCBI taxonomy Id: 883096
Other names: B. zoohelcum ATCC 43767, Bergeyella zoohelcum ATCC 43767
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