STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKB54213.1Hypothetical protein. (419 aa)    
Predicted Functional Partners:
EKB57586.1
Hypothetical protein.
  
  
 
0.916
EKB55849.1
Hypothetical protein.
  
  
 
0.916
EKB59489.1
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.
  
  0.912
EKB59560.1
Hypothetical protein; Belongs to the peptidase M17 family.
 
 
  0.910
mdh
Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
 0.907
EKB57536.1
Aspartate kinase; Belongs to the aspartokinase family.
  
 0.905
EKB56680.1
1-pyrroline-5-carboxylate dehydrogenase.
   
  0.904
EKB55491.1
Hypothetical protein.
   
 
 0.904
EKB54390.1
Citrate (Si)-synthase; Belongs to the citrate synthase family.
  
 
 0.904
EKB59450.1
Hypothetical protein.
  
 
 0.900
Your Current Organism:
Bergeyella zoohelcum
NCBI taxonomy Id: 883096
Other names: B. zoohelcum ATCC 43767, Bergeyella zoohelcum ATCC 43767
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.