Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO86232.1Hypothetical protein. (127 aa)    
Predicted Functional Partners:
EHO86233.1
Hypothetical protein.
       0.709
EHO86234.1
Hypothetical protein.
       0.645
EHO86235.1
Hypothetical protein.
       0.645
purC
Phosphoribosylaminoimidazole-succinocarboxamide synthase; Belongs to the SAICAR synthetase family.
       0.628
EHO85876.1
Pyruvate:ferredoxin oxidoreductase.
  
  
 0.595
EHO86691.1
Hypothetical protein.
  
     0.579
EHO86181.1
Hypothetical protein.
  
     0.571
EHO82694.1
Hypothetical protein.
  
     0.566
EHO86230.1
Hypothetical protein.
       0.544
EHO86953.1
Hypothetical protein.
  
  0.529
Your Current Organism:
Eubacterium infirmum
NCBI taxonomy Id: 883109
Other names: E. infirmum F0142, Eubacterium infirmum F0142
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