Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO86251.1Hypothetical protein; Belongs to the peptidase S41A family. (384 aa)    
Predicted Functional Partners:
EHO86250.1
single-stranded-DNA-specific exonuclease RecJ.
 
    0.814
EHO82621.1
Hypothetical protein.
  
 
 0.781
EHO85876.1
Pyruvate:ferredoxin oxidoreductase.
   
 
 0.747
EHO86249.1
Hypothetical protein.
 
  
 0.710
EHO86690.1
Hypothetical protein.
 
  
 0.600
EHO82422.1
RIP metalloprotease RseP.
 
  
 0.597
EHO86248.1
Hypothetical protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
     0.572
EHO86252.1
TrpR protein YerC/YecD.
       0.554
pheT
phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
   
 
 0.517
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
       0.504
Your Current Organism:
Eubacterium infirmum
NCBI taxonomy Id: 883109
Other names: E. infirmum F0142, Eubacterium infirmum F0142
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