Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO86252.1TrpR protein YerC/YecD. (100 aa)    
Predicted Functional Partners:
EHO86250.1
single-stranded-DNA-specific exonuclease RecJ.
       0.564
EHO86251.1
Hypothetical protein; Belongs to the peptidase S41A family.
       0.554
EHO86253.1
Hypothetical protein; Belongs to the P-Pant transferase superfamily.
       0.550
EHO86254.1
Hypothetical protein; Modulates RecA activity; Belongs to the RecX family.
       0.550
EHO86249.1
Hypothetical protein.
 
     0.447
Your Current Organism:
Eubacterium infirmum
NCBI taxonomy Id: 883109
Other names: E. infirmum F0142, Eubacterium infirmum F0142
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.