Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO86276.1Hypothetical protein. (453 aa)    
Predicted Functional Partners:
EHO86275.1
Hypothetical protein.
 
 
 0.992
EHO85876.1
Pyruvate:ferredoxin oxidoreductase.
    
 0.955
EHO85302.1
RNA polymerase sigma-54 factor.
 
  
 0.888
EHO86274.1
Hypothetical protein.
 
 
 0.863
EHO84159.1
Hypothetical protein.
  
  
 0.751
EHO86331.1
Hypothetical protein.
   
 0.605
EHO82160.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.564
clpX
ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
    
 0.539
clpP
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
    
 0.538
EHO85859.1
Hypothetical protein.
 
 
 0.529
Your Current Organism:
Eubacterium infirmum
NCBI taxonomy Id: 883109
Other names: E. infirmum F0142, Eubacterium infirmum F0142
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