Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO86285.1Hypothetical protein. (115 aa)    
Predicted Functional Partners:
EHO86292.1
Hypothetical protein; Essential cell division protein.
  
 0.992
EHO86651.1
Hypothetical protein.
    
 0.970
EHO86286.1
Hypothetical protein.
  
 0.956
EHO86290.1
Hypothetical protein; Belongs to the SEDS family.
  
 0.946
rsmH
Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
  
  
 0.925
EHO82451.1
Hypothetical protein; Belongs to the SEDS family.
  
 0.909
EHO85914.1
Hypothetical protein; Belongs to the SEDS family.
  
 0.908
EHO85915.1
Hypothetical protein.
  
 0.904
EHO82449.1
Hypothetical protein.
  
 0.904
mraZ
Hypothetical protein; Belongs to the MraZ family.
  
  
 0.884
Your Current Organism:
Eubacterium infirmum
NCBI taxonomy Id: 883109
Other names: E. infirmum F0142, Eubacterium infirmum F0142
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