STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO85318.1Hypothetical protein. (315 aa)    
Predicted Functional Partners:
EHO84159.1
Hypothetical protein.
  
 
 0.819
EHO85319.1
Hypothetical protein.
  
    0.778
EHO85316.1
Hypothetical protein.
       0.757
EHO85317.1
Hypothetical protein.
       0.757
EHO86976.1
Hypothetical protein.
  
 0.678
EHO82633.1
Hypothetical protein.
  
 
   0.669
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
       0.668
EHO84661.1
Hypothetical protein.
   
 
 0.581
EHO85314.1
Oligoendopeptidase F.
 
     0.543
ybeY
Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
 
 0.527
Your Current Organism:
Eubacterium infirmum
NCBI taxonomy Id: 883109
Other names: E. infirmum F0142, Eubacterium infirmum F0142
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.