Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO84161.1Hypothetical protein. (171 aa)    
Predicted Functional Partners:
EHO84159.1
Hypothetical protein.
 
 0.999
EHO84160.1
Hypothetical protein.
 0.999
EHO82645.1
Hypothetical protein.
 
 0.998
rnfB
Hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 0.995
EHO82693.1
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
 0.977
EHO85876.1
Pyruvate:ferredoxin oxidoreductase.
   
 0.916
EHO83308.1
Hypothetical protein.
    
  0.915
EHO82600.1
Hypothetical protein.
    
  0.915
EHO82642.1
Hypothetical protein.
  
 0.903
EHO85554.1
Hypothetical protein.
   
 0.893
Your Current Organism:
Eubacterium infirmum
NCBI taxonomy Id: 883109
Other names: E. infirmum F0142, Eubacterium infirmum F0142
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