Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO84185.1Hypothetical protein. (123 aa)    
Predicted Functional Partners:
EHO84187.1
Hypothetical protein.
     0.964
EHO84186.1
Hypothetical protein.
 
     0.942
EHO84191.1
Hypothetical protein.
 
     0.816
EHO84188.1
Hypothetical protein.
 
    0.810
EHO84189.1
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    0.787
EHO84190.1
Heme ABC transporter, heme-binding protein isdE.
 
    0.782
EHO84350.1
Hypothetical protein.
 
     0.770
EHO84192.1
Hypothetical protein.
       0.414
Your Current Organism:
Eubacterium infirmum
NCBI taxonomy Id: 883109
Other names: E. infirmum F0142, Eubacterium infirmum F0142
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