Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO83262.1Hypothetical protein. (809 aa)    
Predicted Functional Partners:
EHO83263.1
Hypothetical protein.
 
    0.951
EHO83265.1
Hypothetical protein.
 
     0.926
EHO83260.1
Hypothetical protein.
 
   
 0.898
EHO83259.1
Hypothetical protein.
 
     0.863
EHO83277.1
Hypothetical protein.
 
     0.857
EHO83257.1
Hypothetical protein.
 
  
 0.853
EHO83266.1
Hypothetical protein.
 
  
 0.811
EHO83740.1
Hypothetical protein.
 
  
 0.788
EHO83264.1
Hypothetical protein.
       0.745
EHO83267.1
Hypothetical protein.
 
    0.694
Your Current Organism:
Eubacterium infirmum
NCBI taxonomy Id: 883109
Other names: E. infirmum F0142, Eubacterium infirmum F0142
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