Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO83278.1Hypothetical protein. (272 aa)    
Predicted Functional Partners:
EHO83277.1
Hypothetical protein.
 
     0.900
EHO83261.1
Hypothetical protein.
 
     0.794
EHO83265.1
Hypothetical protein.
 
     0.752
EHO83735.1
Hypothetical protein.
  
     0.739
EHO83263.1
Hypothetical protein.
 
     0.728
EHO83281.1
Hypothetical protein.
  
     0.717
EHO83738.1
Hypothetical protein.
  
    0.705
EHO83290.1
Hypothetical protein.
  
     0.705
EHO83282.1
Hypothetical protein.
  
    0.687
EHO83740.1
Hypothetical protein.
 
     0.686
Your Current Organism:
Eubacterium infirmum
NCBI taxonomy Id: 883109
Other names: E. infirmum F0142, Eubacterium infirmum F0142
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