Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO83212.1Hypothetical protein. (301 aa)    
Predicted Functional Partners:
EHO83211.1
Hypothetical protein.
     0.986
EHO83213.1
Hypothetical protein.
       0.662
EHO82607.1
Hypothetical protein.
  
     0.556
EHO84337.1
Hypothetical protein.
  
     0.512
EHO82613.1
Hypothetical protein.
  
     0.505
EHO85968.1
Hypothetical protein.
  
     0.503
EHO83308.1
Hypothetical protein.
  
     0.480
EHO83305.1
Hypothetical protein.
  
     0.479
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
     
  0.446
EHO84339.1
Hypothetical protein.
  
     0.407
Your Current Organism:
Eubacterium infirmum
NCBI taxonomy Id: 883109
Other names: E. infirmum F0142, Eubacterium infirmum F0142
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