Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO82608.1Hypothetical protein. (388 aa)    
Predicted Functional Partners:
EHO82607.1
Hypothetical protein.
       0.773
EHO82609.1
Hypothetical protein.
       0.773
EHO82610.1
Hypothetical protein.
       0.608
EHO82606.1
Hypothetical protein.
       0.603
EHO82611.1
Hypothetical protein.
       0.548
EHO82605.1
Hypothetical protein.
       0.518
EHO82612.1
Hypothetical protein.
       0.438
Your Current Organism:
Eubacterium infirmum
NCBI taxonomy Id: 883109
Other names: E. infirmum F0142, Eubacterium infirmum F0142
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