Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO82611.1Hypothetical protein. (113 aa)    
Predicted Functional Partners:
EHO82610.1
Hypothetical protein.
       0.693
EHO82612.1
Hypothetical protein.
       0.603
EHO82607.1
Hypothetical protein.
       0.548
EHO82608.1
Hypothetical protein.
       0.548
EHO82609.1
Hypothetical protein.
       0.548
EHO82613.1
Hypothetical protein.
       0.491
EHO82606.1
Hypothetical protein.
       0.438
EHO82614.1
Hypothetical protein.
       0.411
Your Current Organism:
Eubacterium infirmum
NCBI taxonomy Id: 883109
Other names: E. infirmum F0142, Eubacterium infirmum F0142
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