STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO82625.1Hypothetical protein. (284 aa)    
Predicted Functional Partners:
EHO86586.1
Hypothetical protein; Belongs to the precorrin methyltransferase family.
  
 
 0.869
EHO82624.1
Hypothetical protein.
       0.803
EHO82623.1
Hypothetical protein.
       0.764
EHO86504.1
Hypothetical protein.
 
    0.563
EHO84159.1
Hypothetical protein.
 
   
 0.562
birA
Hypothetical protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.550
EHO84664.1
Hypothetical protein.
   
 
 0.548
EHO86582.1
Hypothetical protein.
  
    0.502
EHO82626.1
Hypothetical protein.
       0.432
EHO83312.1
Hypothetical protein.
  
 
  0.416
Your Current Organism:
Eubacterium infirmum
NCBI taxonomy Id: 883109
Other names: E. infirmum F0142, Eubacterium infirmum F0142
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.