STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKB55377.1Hypothetical protein. (224 aa)    
Predicted Functional Partners:
EKB55381.1
Hypothetical protein.
 
  
 0.937
EKB55380.1
Hypothetical protein.
 
  
 0.933
EKB55386.1
Hypothetical protein.
 
     0.807
EKB55379.1
Hypothetical protein.
 
     0.789
EKB55378.1
Hypothetical protein.
       0.725
EKB56044.1
Hypothetical protein.
  
     0.664
EKB55388.1
Hypothetical protein.
 
     0.654
EKB55130.1
Hypothetical protein.
  
     0.593
EKB56034.1
Hypothetical protein.
  
     0.569
EKB55382.1
Hypothetical protein.
       0.560
Your Current Organism:
Facklamia hominis
NCBI taxonomy Id: 883111
Other names: F. hominis CCUG 36813, Facklamia hominis CCUG 36813
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.