Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKB55380.1Hypothetical protein. (235 aa)    
Predicted Functional Partners:
EKB55377.1
Hypothetical protein.
 
  
 0.933
EKB55381.1
Hypothetical protein.
 
    
0.842
EKB55379.1
Hypothetical protein.
 
     0.838
EKB55386.1
Hypothetical protein.
 
     0.807
EKB55378.1
Hypothetical protein.
       0.775
EKB55385.1
Hypothetical protein.
 
     0.760
EKB55215.1
Hypothetical protein.
 
  
 0.634
EKB55383.1
Hypothetical protein.
       0.598
EKB55382.1
Hypothetical protein.
       0.596
EKB55216.1
Hypothetical protein.
 
    0.578
Your Current Organism:
Facklamia hominis
NCBI taxonomy Id: 883111
Other names: F. hominis CCUG 36813, Facklamia hominis CCUG 36813
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